; (x_0,y_0,z_0) is applicator centroid
; (x_1,y_1,z_1) is applicator tip
[bc]
u_dirichlet = 1
[probe]
x_0 = 0.115e0
y_0 = 0.110e0
z_0 = 0.088e0
x_1 = 0.115e0
y_1 = 0.2e0
z_1 = 0.088e0
domain = 2
applicatordomain = 1
radius = 0.00075
[timestep]
acquisitiontime = 5.00
nsubstep = 5
powerhistory = [[12,23,78,89,96,121,149,167,190,198,250,700],[0.0,4.0,0.0,12.0,0.0,12.0,0.0,12.0,0.0,10.,0.0,12.0]]
[thermal_conductivity]
k_0_healthy = 5.27e-1
k_0_grey    = 5.27e-1
k_0_white   = 5.27e-1
k_0_csf     = 5.27e-1
k_0_tumor   = 5.27e-1
[perfusion]
w_0_healthy = 6.00e0
w_0_grey    = 6.00e0
w_0_white   = 6.00e0
w_0_csf     = 6.00e0
w_0_tumor   = 6.00e0
[optical]
mu_a_healthy = 5.00e+2
mu_a_grey    = 5.00e+2
mu_a_white   = 5.00e+2
mu_a_csf     = 5.00e+2
mu_a_tumor   = 5.00e+2
mu_s_healthy = 1.40e+4
mu_s_grey    = 1.40e+4
mu_s_white   = 1.40e+4
mu_s_csf     = 1.40e+4
mu_s_tumor   = 1.40e+4
; anfact = 0.88e0
[labels]
vessel      = 1
whitematter = 2
greymatter  = 3
csf         = 4
tumor       = 5
[initial_condition]
u_init   = 37.0
[exec]
exodus_file = fem.e
mesh_file = ./meshTemplateFull2.e
;mesh_file = ./meshTemplateFull1.e
contours = [ 42.0 , 57.0]